BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006B06LP1|AL425477
(1024 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig181 1296 0.0
>3x_Contig181
Length = 956
Score = 1296 bits (652), Expect = 0.0
Identities = 682/690 (98%), Gaps = 2/690 (0%)
Strand = Plus / Plus
Query: 17 tatgtattatgtgttattcgagtgttaaa-ggtttattcggaggaagctccgaaagatca 75
||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 264 tatgttttatgtgttattcgagtgtgaaacggtttattcggaggaagctccgaaagatca 323
Query: 76 tacaatgatctcttctattgcatatcagatcatttcagtggaaacgttaaaaccgatctg 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tacaatgatctcttctattgcatatcagatcatttcagtggaaacgttaaaaccgatctg 383
Query: 136 ggaagaagccagaagacattctattgatgctacccattcattaaaaaacaccattcaaag 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggaagaagccagaagacattctattgatgctacccattcattaaaaaacaccattcaaag 443
Query: 196 tatggagaatgctgttatggaaaacgttgctggtgaagagttcgtattgtgttcattgaa 255
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tatggagaatgctgtcatggaaaacgttgctggtgaagagttcgtattgtgttcattgaa 503
Query: 256 ttctacctgggatctaagagtcacattgtctaggcaagcaagagatgagagttggttgtt 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttctacctgggatctaagagtcacattgtctaggcaagcaagagatgagagttggttgtt 563
Query: 316 gccatcgtttttgcaacatcctaaagtatttgatttatggagggaagtggataggtggta 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gccatcgtttttgcaacatcctaaagtatttgatttatggagggaagtggataggtggta 623
Query: 376 ccgtaatcatccagaacagtacg-aaaaaggtacagatcgaggaggtggtaatgttgcca 434
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 624 ccgtaatcatccagaacagtacgaaaaaaggtacagatcgaggaggtggtaatgttgcca 683
Query: 435 ataccaacaccacaacccaaaggaataaacacaaactcgtaaaaagtattgatgcattat 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ataccaacaccacaacccaaaggaataaacacaaactcgtaaaaagtattgatgcattat 743
Query: 495 tggtttttctgaatatagatcttgataacaagtcaacaacggatcagcgtatggagcaag 554
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 744 tggtttttctgaatatagatcttgataacaagtcaacaacggaacagcgtatggagcaag 803
Query: 555 ttaacatcgataagaattcgttcgaaacattgccgtcaatccaacagtgtgagadagttc 614
| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 804 taaacatcgataagaattcgttcgaaacattgccgtcaatccaacagtgtgagaaagttc 863
Query: 615 tattcaaattgcataggaattgtacaagtgataatgaccaaaccttagtgttgacgcatc 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 tattcaaattgcataggaattgtacaagtgataatgaccaaaccttagtgttgacgcatc 923
Query: 675 cgttcgattcataccttgacattaagaatt 704
||||||||||||||||||||||||||||||
Sbjct: 924 cgttcgattcataccttgacattaagaatt 953
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6632
Number of Sequences: 1807
Number of extensions: 6632
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 1024
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1008
effective length of database: 10,329,639
effective search space: 10412276112
effective search space used: 10412276112
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)